Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835533.1_cds_XP_016505973.1_19250
CDS Infomation

[gene=LOC107823778] [db_xref=GeneID:107823778] [protein=ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like] [protein_id=XP_016505973.1] [location=join(2058..2147,2891..3337,3456..4223,4459..4686,5471..6088)] [gbkey=CDS]
Sequence

ATGAAGAGATATCAACTTATACTCTCTTTGTTATTTGTTGGCTTTGCTTTGTCATCAATA
TTACTTCTGAGTTATTTCGAACAGGAGGAGATTAGCTTCCAAGAGTTCAAAAACAAGCTA
CTGGAACCTGGTCTTGTTGATCGAATTGTTGTTGCTAACAAAGATGTAGCCAGAGTTTAT
GTAAGGAGTTCTTCACCTGGTAATAATCAAACTGGTGATGACACCGTTCAAGGTCCTACA
AGTGGTACAAATGGTAATAGAAACATTAGCAACCACAAATACTCTTTTAACATTGGGAGT
GTTGAGTCATTTGAGCAGAAGCTTAAGGAAGCGCAAGAAGCCTTGGGAATAGACTCTCAC
AATTTTGTCTCTGTGGTATATGTTAATGAGTTGGATTGGTTCCCAGAACTGATGAAGTGT
GGTCTAACATTGTTGCTTCTAGCTATCATTTATTATATGGATTTGGGAGGTGCTCGTGGA
ATATTTAATATTGGTAAAGCGCATTTCACCAAGATGGACAAAAATGCAAAGGACAAGGTC
TTCTTCAAGGATGTGGCTGGATGTGACGAGGCTAAGCAAGAAATCATGGAATTCGTTCAC
TTCCTTAAGAATCCCAAGAAATACGAAGAGTTAGGAGCCAAAATTCCTAAGGGTGCTCTT
CTAGTTGGTCCTCCTGGGACTGGAAAGACACTTTTAGCTAAAGCTACAGCAGGAGAATCT
GGTGTACCTTTTCTCTCGATTTCTGGGTCAGAATTTGTGCAGATGTTTGTTGGTGTTGGT
CCTGCTAGAGTTAGGAGCATATTTCGGGAGGCAAGACGATGTGCACCTAGTATAATTTTC
ATCGACGAGATTGATGCAGTAGGTGGAGCAAGAGGGAAGGGACGCTATTCTGGAGGAAAC
GATGAACGTGAGGGTACTTTAAACCAACTGCTTGTAGAAATGGACGGATTTGCAACCACA
TCTGGTGTAGTTGTACTTGCTGGCACAAATAGACTTGATATATTAGACAAAGCCTTGTTA
AGGCCTGGTCGATTTGATCGCCAGATTACCATTGACAAACCAGACATAAAAGGTCGTGAA
CAGATTTTCAGAATCTATCTGAACAAGTTGAAACTTGACCAGGAGGCAGCATTCTATTCA
CAGAGATTTGCTGCTCTAACACCAGGATTTGCTGGAGCAGACATTGCGAATGTTTGTAAT
GAAGCTGCTTTGTTTGCTGCTAGGAGTGAGAGTACCACAATCAAAATGCAACATTTCGAG
GCAGCAATAGACAGGGTGATTGGGGGTCTAGAGAACAAGAACAAGGTCATAAGCAAACTG
GAAAGGAGGACAATTGCGTATCATGAATCCGGCCATGCTATTGCTGGTTGGTTCTTGGAA
CATGCAGAACCATTACTTAAAGTGACAATCATTCCCCGTGGTACAGCAGCACTAGGATTT
GCTCAATATGTTCCCAATGAAAATCTTTTAATGACCAGGGAGCAGCTATTTGATATGACA
TGCATGACACTTGGTGGCCGAGCTGCTGAGCAGGTTTTGATTGGAAAGATCTCATCTGGA
GCTCAAAATGATTTGGAGAAAGTGACCAAGATGACATATGCCCAGGTAGCAGTCTACGGT
TTCAGTGACAAGGTTGGTCTTCTTTCTTTTCCGCAAAGAGATGATACATTTGAGACATCA
AAGCCCTACAGTAGCAAGACTGCAGCAATTATTGACGATGAAGTTAGAGAATGGATCGCC
AAGGCATATGATCGTACCCTACAGCTTATAGAGGAACACAGAGAACATGTAGCTCAGATT
GCAGAATTGCTACTTGAAAAGGAGGTCCTTCATCACGAAGATCTGGTCCAGGTATTGGGT
GAACGCCCATTCGAGAGTAGTGAGCTTACAAACTATAACAGGTTCAAGCAAGGATTCGAA
GAAGAGAATGGAGAAATTAAAGATATCCCTAAGGACATGACAGCACAAGATAATCAATCC
TCTTCTGAGGAATCAGAGGTTGTCCCAATCAGTGTTGTCAAAGGTGAAAACACGCAAAAA
GGAATTGAAAAAGACACAAGGTACATTGGGGCTTTAAGCGTAAAGCGCAAATGTGCATTT
AAAGGATGGGTTTTAGTAAAGAAAGGTGCAGTTAAGAAAAAACAATTATAG

Peptide Sequence

PEP ID

XP_016505973.1
PEP Infomation

PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like [Nicotiana tabacum]
Sequence

MKRYQLILSLLFVGFALSSILLLSYFEQEEISFQEFKNKLLEPGLVDRIVVANKDVARVY
VRSSSPGNNQTGDDTVQGPTSGTNGNRNISNHKYSFNIGSVESFEQKLKEAQEALGIDSH
NFVSVVYVNELDWFPELMKCGLTLLLLAIIYYMDLGGARGIFNIGKAHFTKMDKNAKDKV
FFKDVAGCDEAKQEIMEFVHFLKNPKKYEELGAKIPKGALLVGPPGTGKTLLAKATAGES
GVPFLSISGSEFVQMFVGVGPARVRSIFREARRCAPSIIFIDEIDAVGGARGKGRYSGGN
DEREGTLNQLLVEMDGFATTSGVVVLAGTNRLDILDKALLRPGRFDRQITIDKPDIKGRE
QIFRIYLNKLKLDQEAAFYSQRFAALTPGFAGADIANVCNEAALFAARSESTTIKMQHFE
AAIDRVIGGLENKNKVISKLERRTIAYHESGHAIAGWFLEHAEPLLKVTIIPRGTAALGF
AQYVPNENLLMTREQLFDMTCMTLGGRAAEQVLIGKISSGAQNDLEKVTKMTYAQVAVYG
FSDKVGLLSFPQRDDTFETSKPYSSKTAAIIDDEVREWIAKAYDRTLQLIEEHREHVAQI
AELLLEKEVLHHEDLVQVLGERPFESSELTNYNRFKQGFEEENGEIKDIPKDMTAQDNQS
SSEESEVVPISVVKGENTQKGIEKDTRYIGALSVKRKCAFKGWVLVKKGAVKKKQL

Transcript Sequence

Gene sequence data has not been registered.